Publications
[ submitted ][2024 ][2023 ][2022 ][ 2021 ] [ 2020 ] [ 2019 ] [ 2018 ] [ 2017 ] [ 2016 ] [ 2015 ] [ 2014 ] [ 2012 ] [ 2011 ] [ 2010 ] [ 2009 ] [ 2008 ] [ 2007 ] [ 2006 ] [ 2005 ] [ 2004 ] [ 2003 ]
Submitted
134 |
Brainbots as smart autonomous active particles with programmable motion |
M. Noirhomme, I. Mammadli, N. Vanesse, J. Pande, A.-S. Smith, N. Vandewalle submitted to Phys. Rev. Applied. DOI: 10.48550/arXiv.2411.01943 |
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133 |
Critical Casimir levitation of colloids above a bull’s-eye pattern |
P. Nowakowski, N. Farahmand Bafi, G. Volpe, S. Kondrat, S. Dietrich submitted to J. Chem. Phys. DOI: 10.48550/arXiv.2409.08366 |
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132 |
Deciphering the role of the nanoscale clustering of activating and costimulatory antibodies on T cell activation |
G. Le Saux, P. Nowakowski, E. Toledo, S. Tzdaka, A. Al-Kader Yassin, S. Naaz, Y. Segal, B. Maman, A. Porgador, A.-S. Smith, M. Schvartzman submitted to Adv. Healthc. Mater. DOI: 10.1101/2024.09.28.615509 |
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131 | Criticality in an imidazolium ionic liquid fully wetting a sapphire support |
K. Höllring, N. Vučemilović-Alagić, D. M. Smith, A.-S. Smith submitted to Journal of Colloid And Interface Science, February 2024 |
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130 | Metachronal coordination at the mesoscale |
S. Ziegler, M. Delens, Y. Collard, M. Hubert, N. Vandewalle, and A.-S. Smith submitted to Phys. Rev. Lett., May 2023 |
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129 | Microswimming with Inertia |
O. Trosman, A. Sukhov, J. Pande, S. Ziegler, M. Hubert, J. Harting, and A.-S. Smith in preparation for Phys. Rev. Fluids, 2020 |
2024
128 | Substrate topography regulating membrane adhesion mediated by receptor-ligand bonds |
Y. Ma, L. Li, A.-S. Smith Appl. Phys. Lett. 125, 153701, October 2024 DOI: 10.1063/5.0224078 |
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127 |
Capturing the mechanosensitivity of cell proliferation in models of epithelium |
K. Höllring, L. Nuić, L. Rogić, S. Kaliman, S. Gehrer, C. Wollnik, F. Rehfeldt, M. Hubert and A.-S. Smith PNAS, October 2024 DOI: 10.1073/pnas.2308126121 Associated research data available as Zenodo Archive : 10.5281/zenodo.13882071 |
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126 | Assessment of Hydrophilicity/Hydrophobicity in Mesoporous Silica by combining Adsorption, Liquid Intrusion and solid-state NMR spectroscopy |
Cuadrado Collados C, Huber C, Söllner J, Grass J-P, Inayat A, Durdyyev R, Ana Smith , Dorothea Wisser, Martin Hartmann, Matthias Thommes |
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125 |
Nanoalignment by critical Casimir torques |
G. Wang, P. Nowakowski, N. Farahmand Bafi, B. Midtvedt, F. Schmidt, A. Callegari, R. Verre, M. Käll, S. Dietrich, S. Kondrat, G. Volpe |
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124 | Influence of Molecular Hydrogen on Bulk and Interfacial Properties of Three Imidazolium-Based Ionic Liquids by Experiments and Molecular Dynamics Simulations |
Z. Zhai, G. Hantal, A. Cherian, A. Bergen, J. Chu, C. R. Wick, K. Meyer, A.-S. Smith,T. M. Koller |
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123 |
Membrane Fluctuation Model for Understanding the Effect of Receptor Nanoclustering on the Activation of Natural Killer Cells through Biomechanical Feedback |
A. Pandey, P. Nowakowski, C. U. Martin, M. A. Ahmad, A. Edri, E. Toledo, S. Tzadka, J. Walther, G. Le Saux, A. Porgador, A.-S. Smith, M. Schvartzman |
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122 | Dislike of general opinion makes for tight elections |
O. Devauchelle, P. Szymczak, and P. Nowakowski Phys. Rev. E, 109, 044106, April 2024 DOI: 10.1103/PhysRevE.109.044106 |
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121 | Anisotropic molecular diffusion in confinement II: A model for structurally complex particles applied to transport in thin ionic liquid films |
K. Höllring, A. Baer, N. Vučemilović-Alagić, D. M. Smith, A.-S. Smith Journal of Colloid And Interface Science,Volume 657, March 2024, Pages 272-289 DOI: 10.1016/j.jcis.2023.11.137 Code available on github: https://github.com/puls-group/diffusion_in_slit_pores (ZENODO archive: 10.5281/zenodo.7446070) Associated research data is available at ZENODO: 10.5281/zenodo.10201004 |
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120 | A Digital Twin to Overcome Long-time Challenges in Photovoltaics |
L. Lüer; M. Peters; A.-S. Smith; E. Dorschky; B. M. Eskofier; F. Liers; Jörg Franke; Martin Sjarov; Matthias Brossog; Dirk Guldi; Andreas Maier; Christoph J. Brabec Joule, January 2024 DOI:10.1016/j.joule.2023.12.010 |
2023
119 | Demixing of homogeneous binary lipid membranes induced by protein inclusions |
P. Nowakowski, B.H. Stumpf, A.-S. Smith, A Maciołek Phys. Rev. E, 107, 054120, May 2023 DOI: 10.1103/PhysRevE.107.054120 |
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118 | The Stokes-Einstein-Sutherland equation at the nanoscale revisited |
A. Baer, S. E. Wawra, K. Bielmeier, M. J. Uttinger, D. Smith, W. Peukert, J. Walter, A.-S. Smith Small, October 2023, 2304670 DOI: 10.1002/smll.202304670 Associated research data is available at ZENODO: 10.5281/zenodo.8281244 |
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117 | Morphology as indicator of adaptive changes of model tissues in osmotically and chemically changing environments |
K. Höllring, D. Vurnek, S. Gehrer, D. Dudziak , M. Hubert, and A.-S. Smith Biomaterials Advances, Volume 154, November 2023, 213635 DOI: 10.1016/j.bioadv.2023.213635 Associated research data is available at ZENODO: 10.5281/zenodo.8390432 |
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116 | Block Chemistry for Accurate Modeling of Epoxy Resins |
M. Livraghi, S. Pahi, P. Nowakowski, D. M. Smith, C. R. Wick, A.-S. Smith Journal Physical Chemistry: B August 2023, 127, 7648–7662 DOI: 10.1021/acs.jpcb.3c04724 Associated research data is available at ZENODO: 10.5281/zenodo.5795935 |
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115 | Mesoscopic modelling of epithelial tissues |
K. Höllring and A.-S. Smith, (2022) to be published in Active Matter, edited by Giovanni Volpe, Nuno Araújo, Giorgio Volpe, Agnese Callegari arXiv DOI: 10.48550/ARXIV.2212.09547 (accepted) |
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114 | Anisotropic molecular diffusion in confinement I: Transport of small particles in potential and density gradients |
K. Höllring, A. Baer, N. Vučemilović-Alagić, D. M. Smith, A.-S. Smith JCIS, 650, Part B, 1930-1940 November 2023 DOI: 10.1016/j.jcis.2023.07.088 Code available on github: https://github.com/puls-group/diffusion_in_slit_pores (ZENODO: 10.5281/zenodo.7446070) |
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113 |
Mechanistic Insight into Solution-Based Atomic Layer Deposition of CuSCN Provided by In Situ and Ex Situ Methods |
F. Hilpert, P.-C. Liao, E. Franz, V. Koch, L. Fromm, E. Topraksal, A. Görling, A.-S. Smith, M. Barr, J. Bachmann, O. Brummel and J. Libuda ACS Appl. Mater. Interfaces 15, 15, 19536–19544, April 2023 DOI: 10.1021/acsami.2c16943 |
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112 | Stochastic dynamics of substrate non-uniform stiffness affecting molecular adhesion in cell-substrate interface subjected to tensile loading |
C. Qi, J. Zhang, A.-S. Smith and L. Li Journal of Applied Physics, 133, 22, June 2023. DOI: 10.1063/5.0144595 |
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111 | Observing membrane and cell adhesion via Reflection Interference Contrast Microscopy (RICM) |
A. Abdelrahman, A.-S Smith, K. Sengupta, (2022) The Immune Synapse: Methods and Protocols, Second Edition, edited by C. T. Baldari and M. L. Dustin. Springer Science, April 2023, Vol 2654, 123 – 135 DOI:10.1007/978-1-0716-3135-5_8 |
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110 | Lattice Boltzmann simulations of two linear microswimmers using the immersed boundary method |
D. Geyer, S. Ziegler, A. Sukhov, M. Hubert, A.-S. Smith, O. Aouane, P. Malgaretti, and J. Harting Commun. Comput. Phys. 33,1, pp 310-329, 2023. DOI: 10.4208/cicp.OA-2022-0056 |
2022
109 | Overload wave-memory induces amnesia of a self-propelled particle |
M. Hubert, S. Perrard, N. Vandewalle, M. Labousse Nat Commun 13, 4357, 2022 DOI: 10.1038/s41467-022-31736-z |
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108 | Modelling diffusive transport of particles interacting with slit nanopore walls: The case of fullerenes in toluene filled alumina pores |
A. Baer, P. Malgaretti, M. Kaspereit, J. Harting, A-S. Smith Journal of Molecular Liquids, Volume 368, Part B, 2022 DOI: 10.1016/j.molliq.2022.120636 |
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107 | Sb2Se3 Thin Film Growth by Solution Atomic Layer Deposition |
V. M. Koch, J. Charvot, Y. Cao, C Hartmann, R. G. Wilks, I. Kundrata, I. M-B M-Bacho, N. Gheshlaghi, F. Hoga, T. Stubhan, W. Alex, D. Pokorný, E. Topraksal, A-S Smith, C. J. Brabec, M. Bär, D. M. Guldi, M. K. S. Barr, F. Bureš, and J. Bachmann Chem. Mater., 34, 21, 9392–9401, 2022 DOI: 10.1021/acs.chemmater.2c01550 Download |
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106 | Evaluating the predictive character of the method of constrained geometries simulate external force with density functional theory |
C. R. Wick, E. Topraksal, D.M. Smith, and A.-S. Smith Forces in Mechanics, 9, 100143, 2022 DOI:10.1016/j.finmec.2022.100143 Download Associated research data is available at ZENODO: 10.5281/zenodo.6948604 Source-Code is available via: doi.org/10.5281/zenodo.7079732 |
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105 | First-Principle Coarse-Graining Framework for Scale-Free Bell-Like Association and Dissociation Rates in Thermal and Active Systems |
J. A. Janeš, C. Monzel, D. Schmidt, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith Phys. Rev. X 12, 031030, 2022 DOI: 10.1103/PhysRevX.12.031030 Download |
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104 | Inflammatory activation of FcgR and IFNgR pathways co-influence the differentiation and activity of osteoclasts |
B. Grötsch, E. Schachtschabel, P. Tripal, B. Schmid, A.-S. Smith, G. A. Schett, and A. Bozec Frontiers in Immunology, 2022 DOI: 10.3389/fimmu.2022.958974 Download |
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103 | Bis-Polyethylene Glycol-Functionalized Imidazolium Ionic Liquids: a Multi-Method Approach Towards Bulk and Surface Properties |
V. Seidl, M. Bosch, U. Papp, M. Livraghi, Z. Zhai, C. Wick, T. M. Koller, P. Wasserscheid, F. Maier, A.-S. Smith, J. Bachmann, H.-P. Steinrück, and K. Meyer Journal of Ionic Liquids, 2, 100041, 2022 DOI: 10.1016/j.jil.2022.100041 Download |
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102 | Hydrodynamic particle interactions in linear and radial viscosity gradients |
S. Ziegler and A.-S. Smith Journal of Fluid Mechanics, 943, A29, 2022 DOI: 10.1017/jfm.2022.421 Download |
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101 | Improving the Performance of Supported Ionic Liquid Phase Catalysts for the Ultra-Low-Temperature Water Gas Shift Reaction Using Organic Salt Additives |
P. Wolf, C. R. Wick, J. Mehler, D. Blaumeiser, S. Schötz, T. Bauer, J. Libuda, D. Smith, A.-S. Smith, and M. Haumann ACS Catalysis, 12, 5661-5672, 2022 DOI: 10.1021/acscatal.1c05979 Download |
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100 | Crowding competes with trapping to enhance interfacial diffusion |
M. Cvitković, D. Ghanti, N. Raake, and A.-S. Smith EPJP, 137, 355, 2022 DOI: 10.1140/epjp/s13360-022-02571-4 Download |
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99 | Physics of Organelle Membrane Bridging via Cytosolic Tethers is Distinct From Cell Adhesion |
M. A. Kamal, J. A. Janeš, L. Li, F. Thibaudau, A.-S. Smith, and K. Sengupta Frontiers in Physics, 9, 750539, 2022 DOI: 10.3389/fphy.2021.750539 Download |
2021
98 | Glycerol as a Substrate and Inactivator of Coenzyme B-12-Dependent Diol Dehydratase |
L. Bilić, D. Barić, G. M. Sandala, D. M. Smith, B. Kovačević Chem. Eur. J., 27, 7930, 2021 DOI: 10.1002/chem.202100416 |
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97 | Measuring Entropy Production at the Mesoscale |
A.-S. Smith Physics, 14, 152, 2021 DOI: 10.1103/Physics.14.152 Download |
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96 | Biomechanics as driver of aggregation of tethers in adherent membranes |
L. Li, M. A. Kamal, B. H. Stumpf, F. Thibaudau, K. Sengupta, and A.-S. Smith Soft Matter, 17, 10101-10107, 2021 DOI: 10.1039/D1SM00921D Download |
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95 | Configurational Forces in Bond Order Potentials |
S. E. Birang O., A.-S. Smith, and P. Steinmann Proceedings in Applied Mathematics and Mechanics, 21, e202100160, 2021 DOI: 10.1002/pamm.202100160 Download |
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94 | Phonon-based thermal configurational forces: Definitions and applications in rupture of semiconductors |
S. E. Birang O., A.-S. Smith, and P. Steinmann Engineering Fracture Mechanics, 257, 108014, 2021 DOI: 10.1016/j.engfracmech.2021.108014 Download |
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93 | Protein induced lipid demixing in homogeneous membranes |
B. H. Stumpf, P. Nowakowski, A. Honigmann, C. Eggeling, A. Maciołek, and A.-S. Smith Phys. Rev. Research, 3, L042013, 2021 DOI: 10.1103/PhysRevResearch.3.L042013 Download |
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92 | Atomistic Configurational Forces in Crystalline Fracture |
E. Birang, H. S. Park, A.-S. Smith, and P. Steinmann Forces in Mechanics, 4, 100044, 2021 DOI: 10.1016/j.finmec.2021.100044 Download |
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91 | An exact algorithm to detect the percolation transition in Molecular Dynamics simulations of cross-linking polymer networks |
M. Livraghi, K. Höllring, C. Wick, D. Smith, and A.-S. Smith J. Chem. Theory Comput., 17, 6449-6457, 2021 DOI: 10.1021/acs.jctc.1c00423 Download Source-Code is available via: https://doi.org/10.5281/zenodo.6823422 |
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90 | Six-Color Confocal Immunofluorescence Microscopy with 4-Laser Lines |
L. Heger, J. Lühr, L. Amon, A.-S. Smith, N. Eissing, and D. Dudziak Multiplexed Imaging. Methods in Molecular Biology, 2350, 21-30, 2021 DOI: 10.1007/978-1-0716-1593-5_2 |
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89 | Molecular Forces in Liquid–Liquid Extraction |
M. Špadina, J.-F. Dufrêche, S. Pellet-Rostaing, S. Marčelja, and T. Zemb Langmuir, 37, 10637–10656, 2021 DOI: 10.1021/acs.langmuir.1c00673 Download |
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88 | Theoretical framework for two–microswimmer hydrodynamic interactions |
S. Ziegler, T. Scheel, M. Hubert, J. Harting, and A.-S. Smith New J. Phys., 23, 073041, 2021 DOI: 10.1088/1367-2630/ac1141 Download |
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87 | Atomistic Two-, Three- and Four-Body Potentials. Spatial and Material Settings |
P. Steinmann, A.-S. Smith, E. Birang, A. McBride, and A. Javili J Mech Phys Solids, 154, 104507, 2021 DOI: 10.1016/j.jmps.2021.104507 Download |
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86 | Mechanical Regulation of Epithelial Tissue Homeostasis |
S. Kaliman, M. Hubert, C. Wollnik, L. Nuić, D. Vurnek, S. Gehrer, J. Lovrić, D. Dudziak, F. Rehfeld, and A.-S. Smith Phys. Rev. X, 11, 031029, 2021 DOI: 10.1103/PhysRevX.11.031029 Download |
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85 | The Scallop Theorem and Swimming at the Mesoscale |
M. Hubert, O. Trosman, Y. Collard, A. Sukhov, J. Harting, N. Vandewalle, and A.-S. Smith Phys. Rev. Lett., 126, 224501, 2021 DOI: 10.1103/PhysRevLett.126.224501 Download |
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84 | From Water Solutions to Ionic Liquids with Solid State Nanopores as a Perspective to Study Transport and Translocation Phenomena |
S. Marion, N. Vucemilovic-Alagic, M. Spadina, A. Radenovic, and A.-S. Smith Small, 17, 2100777, 2021 DOI: 10.1002/smll.202100777 Download |
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83 | Molecular Scale Spatio-Chemical Control of the Activating-Inhibitory Signal Integration in NK Cells |
E. Toledo, G. Le Saux, A. Edri, L. Li, M. Rosenberg, Y. Keidar, V. Bhingardive, O. Radinsky, U. Hadad, C. Di Primo, T. Buffeteau, A.-S. Smith, A. Porgador, and M. Schvartzman Sci. Adv., 7, abc1640, 2021 DOI: 10.1126/sciadv.abc1640 Download |
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82 | Molecular biomechanics controls protein mixing and segregation in adherent membranes |
L. Li, B. H. Stumpf, and A.-S. Smith Int. J. Mol. Sci., 22, 3699, 2021 DOI: 10.3390/ijms22073699 Download |
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81 | Regimes of motion of magnetocapillary swimmers |
A. Sukhov, M. Hubert, G. Grosjean, O. Trosman, S. Ziegler, Y. Collard, N. Vandewalle, A.‐S. Smith, and J. Harting Eur. Phys. J. E, 44, 59, 2021 DOI: 10.1140/epje/s10189-021-00065-2 Download |
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80 | On the Control of Dispersion Interactions Between Biological Membranes and Protein Coated Biointerfaces |
R. Blackwell, A. Hemmerle, A. Baer, M. Späth, W. Peukert, D. Parsons, K. Sengupta, and A.-S. Smith J. Colloid Interface Sci., 598, 464-473, 2021 DOI: 10.1016/j.jcis.2021.02.078 Download |
2020
79 | Maturation of monocyte-derived DCs leads to increased cellular stiffness, higher membrane fluidity, and changed lipid composition |
J. J. Lühr, N. Alex, L. Amon, M. Kräter, M. Kubánková, E. Sezgin, C. H. K. Lehmann, L. Heger, G. F. Heidkamp, A.-S. Smith, V. Zaburdaev, R. Böckmann, I. Levental, M. L. Dustin, C. Eggeling, J. Guck, and D. Dudziak Front. Immunol., 11, 590121, 2020 DOI: 10.3389/fimmu.2020.590121 Download |
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78 | Recent Advances and Prospects in the Research of Nascent Adhesions |
B. H. Stumpf, A. Ambriović-Ristov, A. Radenovic and A.‐S. Smith Front. Physiol., 11, 574371, 2020 DOI: 10.3389/fphys.2020.574371 Download |
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77 | Catalytic Flow With a Coupled Finite Difference – Lattice Boltzmann Scheme |
N. Kulyk, D. Berger, A.-S. Smith, and J. Harting Comput. Phys. Commun., 256, 107443, 2020 DOI: 10.1016/j.cpc.2020.107443 |
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76 | Quantitative Structural Organization of Bulk Apical Membrane Traffic in Pollen Tubes |
G. Grebnev, M. Cvitkovic, C. Fritz, G. Cai, A.-S. Smith, and B. Kost Plant Physiol., 183, 1559-1585, 2020 DOI: 10.1104/pp.20.00380 Download |
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75 | Adsorption of Aspartate Derivatives to Calcite Surfaces in Aqueous Environment |
R. Stepić, L. Jurković, K. Klementyeva, M. Ukrainczyk, M. Gredičak, D. M. Smith, D. Kralj, and A.-S. Smith Cryst. Growth Des., 20, 2853-2859, 2020 DOI: 10.1021/acs.cgd.0c00061 Download |
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74 | Structural characterization of an ionic liquid in bulk and in nano-confined environment using data from MD simulations |
N. Vučemilović-Alagić, R. D. Banhatti, R. Stepić, C. R. Wick, D. Berger, M. U. Gaimann, A. Baer, J. Harting, D. M. Smith, and A.-S. Smith Data in Brief, 28, 104794, 2020 DOI: 10.1016/j.dib.2019.104794 Download |
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73 | Cu Carbonyls Enhance the Performance of Ru-based SILP Water-Gas Shift Catalysts: A Combined in-situ DRIFTS and DFT Study |
D. Blaumeiser, R. Stepić, P. Wolf, C. R. Wick, M. Haumann, P. Wasserscheid, D. M. Smith, A.-S. Smith, T. Bauer, and J. Libuda Catal. Sci. Technol., 10, 252-262, 2020 DOI: 10.1039/C9CY01852B Download |
2019
72 | Tunable bimodal explorations of space from memory-driven deterministic dynamics |
M. Hubert, S. Perrard, M. Labousse, N. Vandewalle, Y. Couder Phys. Rev. E, 100, 032201, 2019 DOI: 10.1103/PhysRevE.100.032201 Download |
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71 | A general perturbative approach for bead-based microswimmers reveals rich self-propulsion phenomena |
S. Ziegler, M. Hubert, N. Vandewalle, J. Harting, and A.-S. Smith New J. Phys., 21, 113017, 2019 DOI: 10.1088/1367-2630/ab4fc2 Download |
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70 | Exploring Reactive Conformations of Coenzyme A during Binding and Unbinding to Pyruvate Formate-Lyase |
M. Hanževački, R. D. Banhatti, K. Čondić-Jurkić, A.-S. Smith, and D. M. Smith J. Phys. Chem. A, 123, 9345–9356, 2019 DOI: 10.1021/acs.jpca.9b06913 Download |
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69 | Capillary assemblies in a rotating magnetic field |
G. Grosjean, M. Hubert, Y. Collard, A. Sukhov, J. Harting, A.-S. Smith, and N. Vandewalle Soft Matter, 15, 9093-9103, 2019 DOI: 10.1039/C9SM01414D Download |
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68 | A comprehensive Brownian Dynamics approach for the determination of non-ideality parameters from analytical ultracentrifugation |
M. J. Uttinger, S. E. Wawra, T. Guckeisen, J. Walter, A. Baer, T. Thajudeen, P. J. Sherwood, A. Smith, A. M. Wagemans, W. F. Stafford, and W. Peukert Langmuir, 35, 11491-11502, 2019 DOI: 10.1021/acs.langmuir.9b01916 Download |
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67 | Geometric Effects in Random Assemblies of Ellipses |
J. Lovrić, S. Kaliman, W. Barfuß, G. E. Schröder-Turk, and A.-S. Smith Soft Matter, 15, 8566-8577, 2019 DOI: 10.1039/C9SM01067J Download |
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66 | The Impact of Rate Formulations on Stochastic Molecular Motor Dynamics |
R. Blackwell, D. Jung, M. Bukenberger, and A.-S. Smith Sci Rep, 9, 18373, 2019 DOI: 10.1038/s41598-019-54344-2 Download |
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65 | Optimal motion of triangular magnetocapillary swimmers |
A. Sukhov, S. Ziegler, Q. Xie, O. Trosman, J. Pande, G. Grosjean, M. Hubert, N. Vandewalle, A.-S. Smith, and J. Harting J. Chem. Phys., 151, 124707, 2019 DOI: 10.1063/1.5116860 Download |
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64 | Improving the Performance of Supported Ionic Liquid Phase (SILP) catalysts for the Ultra-Low-Temperature Water-Gas Shift Reaction Using Metal Salt Additives |
P. Wolf, M. Aubermann, M. Wolf, T. Bauer, D. Blaumeiser, R. Stepić, C. R. Wick, D. M. Smith, A.-S. Smith, P. Wasserscheid, J. Libuda, and M. Haumann Green Chem., 21, 5008-5018, 2019 DOI: 10.1039/C9GC02153A Download |
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63 | Statistical Mechanics of an Elastically Pinned Membrane: Equilibrium Dynamics and Power Spectrum |
J. A. Janeš, D. Schmidt, R. Blackwell, U. Seifert, and A.-S. Smith Biophys. J., 117, 542-552, 2019 DOI: 10.1016/j.bpj.2019.06.036 Download |
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62 | Computational Study of Glycerol Binding within the Active Site of Coenzyme B12-Dependent Diol Dehydratase |
L. Bilić, D. Barić, R. D. Banhatti, D. M. Smith, and B. Kovačević J. Phys. Chem. B, 123, 6178-6187, 2019 DOI: 10.1021/acs.jpcb.9b04071 Download |
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61 | Insights from Molecular Dynamics Simulations on Structural Organization and Diffusion of an Ionic Liquid at Solid and Vacuum Interfaces |
N. Vučemilović-Alagić, R. D. Banhatti, R. Stepić, C. R. Wick, D. Berger, M. U. Gaimann, A. Baer, J. Harting, D. M. Smith, and A.-S. Smith J. Colloid Interface Sci., 553, 350-363, 2019 DOI: 10.1016/j.jcis.2019.06.017 |
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60 | The Influence of Chemical Change on Protein Dynamics: A Case Study with Pyruvate Formate-Lyase |
M. Hanževački, K. Čondić-Jurkić, R. D. Banhatti, A.-S. Smith, and D. M. Smith Chem. Eur. J., 25, 8741-8753, 2019 DOI: 10.1002/chem.201900663 Download Cover Profile |
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59 | Water in an Electric Field does not Dance Alone: The relation between equilibrium structure, time dependent viscosity and molecular motions |
A. Baer, Z. Miličević, D. M. Smith, and A.-S. Smith J. Mol. Liq., 282, 303-315, 2019 DOI: 10.1016/j.molliq.2019.02.055 Download |
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58 | Semi-automatic Cell Correspondence Analysis using Iterative Point Cloud Registration |
S. Chen*, S. Gehrer*, S. Kaliman, N. Ravikumar, A. Becit, M. Aliee, D. Dudziak, R. Merkel, A.-S. Smith, and A. Maier Informatik-Aktuell, Bildverarbaitung fur die Medizin, 116-121, 2019 DOI: 10.1007/978-3-658-25326-4_26 Download |
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57 | Universal Hidden Order in Amorphous Cellular Geometries |
M. A. Klatt, J. Lovrić, D. Chen, S. C. Kapfer, F. M. Schaller, P. W. A. Schönhöfer, B. S. Gardiner, A.-S. Smith, G. E. Schröder-Turk, and S. Torquato Nat. Comm., 10, 811, 2019 DOI: 10.1038/s41467-019-08360-5 Download |
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56 | Adhesion of Biological Membranes |
K. Sengupta and A.-S. Smith in Physics of Biological Membranes, edt. P. Bassereau and P. Sens, Springer, 499-535, 2019 DOI: 10.1007/978-3-030-00630-3 |
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55 | Measuring GUV adhesion |
A.-S. Smith and K. Sengupta in The Giant Vesicle Book, edt. R. Dimova and C. Marques, Taylor and Francis, 2019 Abstract |
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54 | Statistical Mechanics of an Elastically Pinned Membrane: Static Profile and Correlations |
J. A. Janeš, H. Stumpf, D. Schmidt, U. Seifert, and A.-S. Smith Biophys. J., 116, 283-295, 2019 DOI: 10.1016/j.bpj.2018.12.003 Download |
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53 | Mechanism of the Water-Gas Shift Reaction Catalyzed by Efficient Ruthenium Based Catalysts |
R. Stepić, C. R. Wick, V. Strobel, D. Berger, N. Vučemilović-Alagić, M. Haumann, P. Wasserscheid, A.-S. Smith, and D. M. Smith Angew. Chem., 58, 741-745, 2019 DOI: 10.1002/anie.201811627 Download |
2018
52 | Dynamic Equilibria in Supported Ionic Liquid Phase (SILP) Catalysis: In-Situ IR Spectroscopy Identifies [Ru(CO)xCly]n Species in Water Gas Shift Catalysis |
T. Bauer, R. Stepić, P. Wolf, F. Kollhoff, W. Karawacka, C. R. Wick, M. Haumann, P. Wasserscheid, D. M. Smith, A.-S. Smith, and J. Libuda Catal. Sci. Technol. 8, 344-357, 2018 DOI: 10.1039/C7CY02199B Download |
2017
51 | Structural basis for the shielding function of the dynamic trypanosome variant surface glycoprotein coat |
T. Bartossek, N. G. Jones, C. Schäfer, M. Cvitković, M. Glogger, H. R. Mott, J. Kuper, M. Brennich, M. Carrington, A.-S. Smith, S. Fenz, C. Kisker, and M. Engstler Nature Microbiology 2, 1523-1532, 2017 DOI: 10.1038/s41564-017-0013-6 |
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50 | Asymptotic expansions of the hypergeometric function with two large parameters—application to the partition function of a lattice gas in a field of traps |
M. Cvitković, A.-S. Smith, and J. Pande J. Phys. A: Math. Theor. 50, 265206, 2017 DOI: 10.1088/1751-8121/aa7213 Download |
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49 | Membrane fluctuations mediate lateral interaction between cadherin bonds |
S. F. Fenz, T. Bihr, D. Schmidt, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith Nature Physics 13, 906-913, 2017 DOI: 10.1038/nphys4138 Download |
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48 | Effect of body deformability on microswimming |
J. Pande, L. Merchant, T. Krüger, J. Harting, and A.-S. Smith Soft Matter 13, 3984-3993, 2017 DOI: 10.1039/C7SM00181A Download |
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47 | Measuring the Invisible: Determining the Size of Growing Nanodomains Using the “Inverse FCS” |
S. F. Fenz , A.-S. Smith, and C. Monzel Biophysical Journal 112, 2245-2246, 2017 DOI: 10.1016/j.bpj.2017.04.014 Download |
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46 | Setting the pace of microswimmers: when increasing viscosity speeds up self-propulsion |
J. Pande, L. Merchant, T. Krüger, J. Harting, and A.-S. Smith New J. Phys. 19, 053024, 2017 DOI: 10.1088/1367-2630/aa6e3a Download |
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45 | Lattice Boltzmann simulations of the bead-spring microswimmer with a responsive stroke—from an individual to swarms |
K. Pickl, J. Pande, H. Köstler, U. Rüde, and A.-S. Smith J Phys.: Condens. Matter 29, 124001, 2017 DOI: 10.1088/1361-648X/aa5a40 Download |
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44 | Physical determinants of bipolar mitotic spindle assembly and stability in fission yeast |
R. Blackwell, C. Edelmaier, O. Sweezy-Schindler, A. Lamson, Z. R. Gergely, E. O’Toole, A. Crapo, L. E. Hough, J. R. McIntosh, M. A. Glaser, and M. D. Betterton Sci. Adv. 3, 1601603, 2017 DOI: 10.1126/sciadv.1601603 Download |
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43 | Radial growth in two dimensions revisited: The effect of finite density, binding affinity, reaction rates and diffusion |
T. Bihr, F.-Z. Sadafi, U. Seifert, R. Klupp Taylor, and A.-S. Smith Adv. Mater. Interfaces 4, 1600310, 2017 DOI: 10.1002/admi.201600310 Download |
2016
42 | Limits of applicability of the Voronoi tessellation determined by centres of cell nuclei to epithelium morphology |
S. Kaliman, C. Jayachandran, F. Rehfeldt, and A.-S. Smith Front. Physiol. 7, 551, 2016 DOI: 10.3389/fphys.2016.00551 Download |
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41 | Alive and twitching |
A.-S. Smith Nat. Phys. 12, 378-379, 2016 DOI: 10.1038/nphys3703 Download |
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40 | Nanometric Thermal Fluctuations of Weakly Confined Bio-membranes Measured with Microsecond Time-Resolution |
C. Monzel, D. Schmidt, U. Seifert, A.-S. Smith, R. Merkel, and K. Sengupta Soft Matter 12, 4755-4768, 2016 DOI: 10.1039/C6SM00412A Download |
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39 | When do microswimmers exit the Stokes regime |
K. Pickl, J. Pande, H. Köstler, A. Smith, and U. Rüde arXiv publication, Article Number: 1603.04633, 2016 DOI: http://arxiv.org/pdf/1603.04633v1.pdf |
2015
38 | Measuring fast stochastic displacements of bio-membranes with dynamic optical displacement spectroscopy |
C. Monzel, D. Schmidt, C. Kleusch, D. Kirchenbüchler, U. Seifert, A.-S. Smith, K. Sengupta, and R. Merkel Nat. Commun. 6, 8162, 2015 DOI: 10.1038/ncomms9162 Download |
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37 | Crowding of receptors induces ring-like adhesions in model membranes |
D. Schmidt, T. Bihr, S. Fenz, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith BBA: Mol. Cell Res. 1853, 2984-2991, 2015 DOI: 10.1016/j.bbamcr.2015.05.025 Download |
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36 | Multiscale approaches to protein-mediated interactions between membranes-Relating microscopic and macroscopic dynamics in radially growing adhesions |
T. Bihr, U. Seifert, and A.-S. Smith New J. Phys. 17, 083016, 2015 DOI: 10.1088/1367-2630/17/8/083016 Download |
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35 | Complementary Molecular Dynamics and X-Ray Reflectivity Study of an Imidazolium-Based Ionic Liquid at a Neutral Sapphire Interface |
Z. Brkljača, M. Klimczak, Z. Miličević, M. Weisser, N. Taccardi, P. Wasserscheid, D. M. Smith, A. Magerl, and A.-S. Smith J. Phys. Chem. Lett. 6, 549-555, 2015 DOI: 10.1021/jz5024493 Download |
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34 | Forces and shapes as determinants of micro-swimming: effect on synchronisation and the utilisation of drag |
J. Pande and A.-S. Smith Soft Matter 11, 2364-2371, 2015 DOI: 10.1039/C4SM02611J Download |
2014
33 | Liquid Crystalline Phase Formation in Suspensions of Solid Trimyristin Nanoparticles |
S. Gehrer, M. Schmiele, M. Westermann, F. Steiniger, T. Unruh J. Phys. Chem. B, 118, 38, 11387–11396, 2014 DOI: 10.1021/jp506787v |
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32 | Facile colloidal coating of polystyrene nanospheres with tunable gold dendritic patches |
H. Bao, T. Bihr, A.-S. Smith, R.T Klupp Nanoscale, 6, 3954-3966, 2014 DOI: 10.1039/C3NR04016J |
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31 | Parallel Simulations of Self-propelled Microorganisms |
K. Pickl, M. Hofmann, T. Preclik, H. Köstler, A.-S. Smith, U. Rüde Advances in Parallel Computing, 25, 395-404, 2016 DOI: 10.3233/978-1-61499-381-0-395 Download |
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30 | Association Rates of Membrane-Coupled Cell Adhesion Molecules |
T. Bihr, S. Fenz, E. Sackmann, R. Merkel, U. Seifert, K. Sengupta, A.-S. Smith Biophys. J. 107, L33-L36, 2014 DOI: 10.1016/j.bpj.2014.10.033 Download |
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29 | Calculating CD Spectra of Flexible Peptides: An Assessment of TD-DFT Functionals |
Z. Brkljača, M. Mališ, D. M. Smith, and A.-S. Smith J. Chem. Theory Comput. 10, 3270-3279, 2014 DOI: 10.1021/ct500071t Download |
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28 | Establishing conditions for simulating hydrophobic solutes in electric fields by molecular dynamics |
Z. Miličević, S. J. Marrink, A.-S. Smith, and D. M. Smith J. Mol. Model. 20, 2359, 2014 DOI: 10.1007/s00894-014-2359-5 Download |
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27 | Signature of a Nonharmonic Potential as Revealed from a Consistent Shape and Fluctuation Analysis of an Adherent Membrane |
D. Schmidt, C. Monzel, T. Bihr, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith Phys. Rev. X 4, 021023, 2014 DOI: 10.1103/PhysRevX.4.021023 Download |
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26 | Novel Growth Regime of MDCK II Model Tissues on Soft Substrates |
S. Kaliman, C. Jayachandran, F. Rehfeld, and A.-S. Smith Biophys. J. 106, L25-L28, 2014 DOI: 10.1016/j.bpj.2013.12.056 Download |
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25 | Rhodomyrtals A–D, four unusual phloroglucinol-sesquiterpene adducts from Rhodomyrtus psidioides |
Q. Shou, J. E. Smith, H. Mon, Z. Brkljača, A.-S. Smith, D. M. Smith, H. J. Griesser, and Hans Wohlmuth RSC Adv. 4, 13514-13517, 2014 DOI: 10.1039/C4RA00154K Download |
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24 | Facile colloidal coating of polystyrene nanospheres with tunable gold dendritic patches |
H. Bao, T. Bihr, A.-S. Smith, and R. N. Klupp Taylor Nanoscale 6, 3954-3966, 2014 DOI: 10.1039/C3NR04016J Download |
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23 | Physics of cell adhesion: some lessons from cell-mimetic systems |
E. Sackmann and A.-S. Smith Soft Matter 10, 1644-1659, 2014 DOI: 10.1039/C3SM51910D Download |
2012
22 | Nucleation of Ligand-Receptor Domains in Membrane Adhesion |
T. Bihr, U. Seifert, and A.-S. Smith Phys. Rev. Lett. 109, 258101, 2012 DOI: 10.1103/PhysRevLett.109.258101 Download |
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21 | Coexistence of dilute and densely packed domains of ligand-receptor bonds in membrane adhesion |
D. Schmidt, T. Bihr, U. Seifert, and A.-S. Smith EPL 99, 38003, 2012 DOI: 10.1209/0295-5075/99/38003 Download |
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20 | All good things come in threes—Three beads learn to swim with lattice Boltzmann and a rigid body solver |
K. Pickl, J. Götz, K. Iglberger, J. Pande, K. Mecke, A.-S. Smith, and U. Rüde J. Comput. Sci. 3, 374-387, 2012 DOI: 10.1016/j.jocs.2012.04.009 Download |
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19 | Calculation of the CD Spectrum of a Peptide from Its Conformational Phase Space: The Case of Met-enkephalin and Its Unnatural Analogue |
Z. Brkljača, K. Čondić-Jurkić, A.-S. Smith, and D. M. Smith J. Chem. Theory Comput. 8, 1694-1705, 2012 DOI: 10.1021/ct200868y Download |
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18 | The Protonation States of the Active-Site Histidines in (6–4) Photolyase |
K. Čondić-Jurkić, A.-S. Smith, H. Zipse, and D. M. Smith J. Chem. Theory Comput. 8, 1078-1091, 2012 DOI: 10.1021/ct2005648 Download |
2011
17 | Switching from Ultraweak to Strong Adhesion |
S. F. Fenz, T. Bihr, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith Adv. Mater. 23, 2622-2626, 2011 DOI: 10.1002/adma.201004097 Download |
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16 | Inter-membrane adhesion mediated by mobile linkers: Effect of receptor shortage |
S. F. Fenz, A.-S. Smith, R. Merkel, and K. Sengupta Soft Matter 7, 952-962, 2011 DOI: 10.1039/C0SM00550A Download |
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15 | Two intertwined facets of adherent membranes: membrane roughness and correlations between ligand–receptors bonds |
E. Reister, T. Bihr, U. Seifert, and A.-S. Smith New J. Phys. 13, 025003, 2011 DOI: 10.1088/1367-2630/13/2/025003 Download |
2010
14 | Physics challenged by cells |
A.-S. Smith Nat. Phys. 6, 726-729, 2010 DOI: 10.1038/nphys1798 Download |
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13 | Inferring spatial organization of bonds within adhesion clusters by exploiting fluctuations of soft interfaces |
A.-S. Smith, S. F. Fenz, and K. Sengupta EPL 89, 28003, 2010 DOI: 10.1209/0295-5075/89/28003 Download |
2009
12 | Progress in Mimetic Studies of Cell Adhesion and the Mechanosensing |
A.-S. Smith and E. Sackmann ChemPhysChem 10, 66-78, 2009 DOI: 10.1002/cphc.200800683 Download |
2008
11 | Dynamics of Specific Vesicle-Substrate Adhesion: From Local Events to Global Dynamics |
E. Reister-Gottfried, K. Sengupta, B. Lorz, E. Sackmann, U. Seifert, and A.-S. Smith Phys. Rev. Lett. 101, 208103, 2008 DOI: 10.1103/PhysRevLett.101.208103 Download |
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10 | Force-induced growth of adhesion domains is controlled by receptor mobility |
A.-S. Smith, K. Sengupta, S. Goennenwein, U. Seifert, and E. Sackmann Proc. Natl. Acad. Sci. U.S.A. 105, 6906-6911, 2008 DOI: 10.1073/pnas.0801706105 Download |
2007
9 | Adhesion of Giant Vesicles Mediated by Weak Binding of Sialyl-LewisX to E-Selectin in the Presence of Repelling Poly(ethylene glycol) Molecules |
B. G. Lorz, A.-S. Smith, C. Gege, and Erich Sackmann Langmuir 23, 12293-12300, 2007 DOI: 10.1021/la701824q Download |
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8 | Vesicles as a model for controlled (de-)adhesion of cells: a thermodynamic approach |
A.-S. Smith and U. Seifert Soft Matter 3, 275-289, 2007 DOI: 10.1039/B611892E Download |
2006
7 | Force-Controlled Equilibria of Specific Vesicle-Substrate Adhesion |
A.-S. Smith, B. G. Lorz, S. Goennenwein, and E. Sackmann Biophys. J. 90, L52-L54, 2006 DOI: 10.1529/biophysj.105.079426 Download |
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6 | Antagonist-Induced Deadhesion of Specifically Adhered Vesicles |
A.-S. Smith, B. G. Lorz, U. Seifert, and E. Sackmann Biophys. J. 90, 1064-1080, 2006 DOI: 10.1529/biophysj.105.062166 Download |
2005
5 | The total solute-water correlation function for Lennard-Jones particles |
A.-S. Smith Fizika A-Zagreb 14, 187-194, 2005 Abstract Download |
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4 | Force-Induced De-Adhesion of Specifically Bound Vesicles: Strong Adhesion in Competition with Tether Extraction |
A.-S. Smith and U. Seifert Langmuir 21, 11357-11367, 2005 DOI: 10.1021/la051303f Download |
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3 | Effective adhesion strength of specifically bound vesicles |
A.-S. Smith and U. Seifert Phys. Rev. E 71, 061902, 2005 DOI: 10.1103/PhysRevE.71.061902 Download |
2004
2 | Pulling Tethers from Adhered Vesicles |
A.-S. Smith, E. Sackmann, and U. Seifert Phys. Rev. Lett. 92, 208101, 2004 DOI: 10.1103/PhysRevLett.92.208101 Download |
2003
1 | Effects of a pulling force on the shape of a bound vesicle |
A.-S. Smith, E. Sackmann, and U. Seifert Europhys. Lett. 64, 281, 2003 DOI: 10.1209/epl/i2003-00499-9 Download |